Nanomaterial data visualization with ambit.js and d3.js

Date/Time
Date(s) - Monday, May 18, 2015
12:00 am

Category(ies)

• Webinar

Presented by Egon Willighagen (Maastricht University) and  Nina Jeliazkova (IDEAconsult Ltd.)

18th May 2015, 5 PM (Central European Time) / 11 AM (US Eastern Time)

The EU FP7 eNanoMapper project is developing a data management and analysis infrastructure together with ontologies supporting the safety assessment activities of the European nanomaterials research and development community. Previous dissemination activities already showed features of the solutions being developed [1-2]. This webinar will demonstrate how the eNanoMapper database Application Programming Interface (API) can be used to extract data to be visualized in graphs [3]. A short outline of the API will be provided. On the client side, this API is used in this presentation by the ambit.js JavaScript library to select data which is then visualized using the d3.js library. Examples will demonstrate how this technically works [4] using the example eNanoMapper database instance [2].

To Join the Meeting:

1. Please join the meeting at the following gotomeeting Web address: https://global.gotomeeting.com/join/712072301
   1. Meeting Password: enm321
   2. Meeting ID: 712-072-301
2. You can join the audio conference call through the Website using VOIP; a microphone and headset attached to your PC is recommended. You can also call in using your telephone through the numbers listed at https://global.gotomeeting.com/712072301/numbersdisplay.html.

References:

1. J Hastings, N Jeliazkova, G Owen, G Tsiliki, CR Munteanu, C Steinbeck, and E Willighagen. eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment, Journal of Biomedical Semantics, March 2015, 10.1186/s13326-015-0005-5.
2. N Jeliazkova, P Doganis, B Fadeel, R Grafstrom, J Hastings, V Jeliazkov, P Kohonen, CR Munteanu, H Sarimveis, B Smeets, G Tsiliki, D Vorgrimmler, E Willighagen. The first eNanoMapper prototype: A substance database to support safe-by-design. Bioinformatics and Biomedicine (BIBM), 2014 IEEE International Conference on. IEEE, 2014. 10.1109/bibm.2014.6999367
3. http://enanomapper.github.io/API/
4. http://enanomapper.github.io/ambit.js/

License: CC-BY 4.0
More information:
Egon Willighagen, egon.willighagen@maastrichtuniversity.nl
Nina Jeliazkova, jeliazkova.nina@gmail.com
Please note that the webinar will be recorded and will be publicly available on http://www.enanomapper.net/